Introduction | Relationship to existing Bioconductor software | Workflow overview | Version information | Installation | Example data | Dense group-specific correlations | Prior-guided sparse differential correlation | Permutation validation | Differential correlation and rewiring | Integrated and focused network | Graph creation | Export | Citation | Session information

Introduction | Import synthetic candidate networks | Import experimental abundance data into the environment | QC checks of all imported objects | Run prior-guided differential correlations | Build differential network. | Calculate rewiring scores. | Run permutation ranking. | Result export | Session information